Protein ZmHAG36
ZmHAG36 is a protein in the GNAT family.
Information
Coreg Name: ZmHAG36
Species: Maize
Coreg Family: GNAT
Gene Name(Synonym): HAGTF36
Uniprot ID: A0A1D6PDQ1
Subgenome: 2

Protein ZmHAG36

ZmHAG36 is a protein in the GNAT family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d048194DAPseq no logo sequence fimo position
Zm00001d048194DAPseq no logo sequence fimo position
Zm00001d048194ChIPseq no logo sequence fimo position
Zm00001d048194PChIPseq no logo sequence fimo position

Interactions where ZmHAG36 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmHAG36 is the target  
Expand


There are 101 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb401150_T003 from maize genome v5

Amino Acid Sequence
Copy to clipboard

MEASEAAPAAADTVMEAEDVSGGKGEWYVLGERALMVPYTREHVPRYHDWMQDPALLEATASEPLSLSQEFEVHRSWTLD
PLKHTFIVLDKELIEGEFVPGNPHIEAMVGDVNIYMNDSDDVQIAEIEIMIAEHKSRGKGIGQEAILLMMAIAVEKYGIH
TFRAKISESNMASLKLFRKLGFKDASYSVVFKEVTLEAPADSLPLRFPLTIGDW

MEASEAAPAAADTVMEAEDVSGGKGEWYVLGERALMVPYTREHVPRYHDWMQDPALLEATASEPLSLSQEFEVHRSWTLD
PLKHTFIVLDKELIEGEFVPGNPHIEAMVGDVNIYMNDSDDVQIAEIEIMIAEHKSRGKGIGQEAILLMMAIAVEKYGIH
TFRAKISESNMASLKLFRKLGFKDASYSVVFKEVTLEAPADSLPLRFPLTIGDW

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available

Nucleotide Sequence
Copy to clipboard
     
Expand

CCGCCGCTCGGCCCAACGCATCAAT...

GRMZM2G096352_T01 from maize genome v3


Related TFome: pUT5746

Amino Acid Sequence
Copy to clipboard

MEASEAAPAAADTVMEAEDVSGGKGEWYVLGERALMVPYTREHVPRYHDWMQDPALLEATASEPLSLSQEFEVHRSWTLD
PLKHTFIVLDKELIEGEFVPGNPHIEAMVGDVNIYMNDSDDVQIAEIEIMIAEHKSRGKGIGQEAILLMMAIAVEKYGIH
TFRAKISESNMASLKLFRKLGFKDASYSVVFKEVTLEAPADSLPLRFPLTIGDW

Nucleotide Sequence
Copy to clipboard
     
Expand

ATCAATTCCGCTTCGGCACTAGACC...

GRMZM2G096352_T02 from maize genome v3

Amino Acid Sequence
Copy to clipboard

MEASEAAPAAADTVMEAEDVSGGKGEWYVLGERALMVPYTREHVPRYHDWMQDPALLEATASEPLSLSQEFEVHRSWTLD
PLKHTFIVLDKELIEGEFVPGNPHIED

Nucleotide Sequence
Copy to clipboard
     
Expand

ACTAGACCACCACTCGCCGACGCCG...

GRMZM2G096352_T03 from maize genome v3

Amino Acid Sequence
Copy to clipboard

MEASEAAPAAADTVMEAEDVSGGKGEWYVLGERALMVPYTREHVPRYHDWMQDPALLEATASEPLSLSQEFEVHRSWTLD
PLKHTFIVLDKELIEGEFVPGNPHIEAMVGDVNIYMNDSDDVQIAEIEIMIAEHKSRGKGIGQEAILLMMAIAVEKYGIH
TFRAKISESNMASLKLFRKLVSTLFCRLLVWSLVCLIRIIFLWFGYRASRMLHTVWCSRR

Nucleotide Sequence
Copy to clipboard
     
Expand

TCAATTCCGCTTCGGCACTAGACCA...

Zm00001d048194_T001 from maize genome v4

Amino Acid Sequence
Copy to clipboard

MEASEAAPAAADTVMEAEDVSGGKGEWYVLGERALMVPYTREHVPRYHDWMQDPALLEATASEPLSLSQEFEVHRSWTLD
PLKHTFIVLDKELIEGEFVPGNPHIEAMVGDVNIYMNDSDDVQIAEIEIMIAEHKSRGKGIGQEAILLMMAIAVEKYGIH
TFRAKISESNMASLKLFRKLGFKDASYSVVFKEVTLEAPADSLPLRFPLTIGDW

Nucleotide Sequence
Copy to clipboard
     
Expand

CTCACACGCCGCCCGCCGCGCAAGT...

Zm00001d048194_T002 from maize genome v4

Amino Acid Sequence
Copy to clipboard

MEASEAAPAAADTVMEAEDVSGGKGEWYVLGERALMVPYTREHVPRYHDWMQDPALLEATASEPLSLSQEFEVHRSWTLD
PLKHTFIVLDKELIEGEFVPGNPHIEAMVGDVNIYMNDSDDVQIAEIEIMIAEHKSRGKGIGQEAILLMMAIAVEKYGIH
TFRAKISESNMASLKLFRKLGFKDASYSVVFKEVTLEAPADSLPLRFPLTIGDW

Nucleotide Sequence
Copy to clipboard
     
Expand

GACCACCACTCGCCGACGCCGCTCC...

Zm00001eb401150_T001 from maize genome v5

Amino Acid Sequence
Copy to clipboard

MEASEAAPAAADTVMEAEDVSGGKGEWYVLGERALMVPYTREHVPRYHDWMQDPALLEATASEPLSLSQEFEVHRSWTLD
PLKHTFIVLDKELIEGEFVPGNPHIEAMVGDVNIYMNDSDDVQIAEIEIMIAEHKSRGKGIGQEAILLMMAIAVEKYGIH
TFRAKISESNMASLKLFRKLVSTLFCRLLVWSLVCLIRIIFLWFGYRASRMLHTVWCSRR

Nucleotide Sequence
Copy to clipboard
     
Expand

GTGATGATCTTTTAATGGTATGGAT...

Zm00001eb401150_T002 from maize genome v5

Amino Acid Sequence
Copy to clipboard

MEASEAAPAAADTVMEAEDVSGGKGEWYVLGERALMVPYTREHVPRYHDWMQDPALLEATASEPLSLSQEFEVHRSWTLD
PLKHTFIVLDKELIEGEFVPGNPHIEAMVGDVNIYMNDSDDVQIAEIEIMIAEHKSRGKGIGQEAILLMMAIAVEKYGIH
TFRAKISESNMASLKLFRKLVSTLFCRLLVWSLVCLIRIIFLWFGYRASRMLHTVWCSRRYGLDLILYLTLTNL

Nucleotide Sequence
Copy to clipboard
     
Expand

GTGATGATCTTTTAATGGTATGGAT...


Copyright © 2023 Grassius.org | Last updated: 2023-06-26